{if ($coreInfo.voa != null)}
{/if}
{if ($coreInfo.diagnosis_info != "not shown: not shown")}
{/if}
{if ($coreInfo.ihc_subtype_info != null)}
{/if}
{if ($coreInfo.her2_fish_avg_signal != null)}
{/if}
{if ($coreInfo.project_info == "08-006 (MA12)")}
{if ($coreInfo.qpcr_subtype_info != null)}
{else}
{/if}
{/if}
{if ($coreInfo.grade != null)}
{/if}
{if ($coreInfo.tumor_size != null)}
{/if}
{if ($coreInfo.dx_age != null)}
{/if}
{if ($coreInfo.sex != null)}
{/if}
{if ($coreInfo.behaviour != null)}
{/if}
{if ($coreInfo.nf1_status != null)}
{/if}
{if ($coreInfo.stage != null)}
{/if}
{if ($coreInfo.adjuvant_therapy != null)}
{/if}
{if ($coreInfo.survival_years != null)}
{/if}
{if ($coreInfo.status_at_end_of_followup != null)}
{/if}
| VOA |
{$coreInfo.voa} |
| GPEC ID |
{$coreInfo.gpec_id} |
| Core # |
{$coreInfo.core_number} |
| Project |
{$coreInfo.project_info} |
| Version |
{$coreInfo.version} |
| Biomarker |
{$coreInfo.biomarker_name} |
| Block |
{$coreInfo.array_block_name} |
| Slice |
{$coreInfo.slice_name} |
| Sector |
{$coreInfo.sector} |
| Row |
{$coreInfo.core_row} |
| Col |
{$coreInfo.core_col} |
| Diagnosis |
{$coreInfo.diagnosis_info} |
Intrinsic Subtype
(IHC panel) |
{$coreInfo.ihc_subtype_info} |
Her2
(FISH) |
average signal: {$coreInfo.her2_fish_avg_signal}
amplification ratio: {$coreInfo.her2_fish_amp_ratio} |
Intrinsic Subtype
(qPCR PAM50) | {$coreInfo.qpcr_subtype_info} | not available |
| Grade |
{$coreInfo.grade} |
| Tumor Size |
{$coreInfo.tumor_size} |
| Dx Age |
{$coreInfo.dx_age} |
| Sex |
{$coreInfo.sex} |
| Behaviour |
{$coreInfo.behaviour} |
| NF1 Status |
{$coreInfo.nf1_status} |
| Stage |
{$coreInfo.stage} |
|
| Adjuvant Therapy |
{$coreInfo.adjuvant_therapy} |
|
| Survival Years |
{$coreInfo.survival_years} |
|
| Status at Last Contact |
{$coreInfo.status_at_end_of_followup} |
|
{foreach from=$autoScore item=score}
| System |
{$score.name} |
| Axis |
{$score.axis} |
| Roundness |
{$score.roundness} |
| Total Nuclei |
{$score.total_nuclei_number} |
| Percent Positive |
{$score.percent_positive_nuclei} |
| Membrane Score |
{$score.membrane_score} |
{foreachelse}
{/foreach}
{if count($coreScore)>0}
{foreach from=$coreScore item=currScore name=score}
{if ($smarty.foreach.score.index % 2 ==0)}
{else}
{/if}
{if ($smarty.session.group_privilege==$smarty.const.GP_ADMIN)}
{/if}
{/foreach}
{if ($smarty.session.group_privilege==$smarty.const.GP_ADMIN)}
{/if}
|
| {$currScore.score_alias}: |
{$currScore.definition} | Edit |
| Add |
{/if}
{foreach from=$fishScore item=score}
| Amplification Ratio |
{$score.amp_ratio} |
| Average Signal |
{$score.average_signal} |
{/foreach}